The detailed information of tRNA gene sequence


Sequence ID>WENV180083413
Genome IDMPMD02057117
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 5537
End posion on genome 5450
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaaataa
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTTATTGCGTTAGTCTTGAAAACTAATGTGTCTTCACGGGCA
CCCTCGGTTCAAATCCGAGCCTCTCCGCtc
Downstream region at tRNA end position 
cggggcgtag
Secondary structure (Cloverleaf model)
>WENV180083413	Ser	TGA
                   a      GCtc cggggcgtag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A G C C     A
      C G A        G      | | | | |     A
    G       G A C G       C T C G G     C
    G       + | | |                 T T
    T       T T G C
      T T A        G     TGTGTCTTCACGGGCACC
                    T - A
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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