The detailed information of tRNA gene sequence


Sequence ID>WENV180083441
Genome IDMPMD02060965
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 20337
End posion on genome 20413
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccgctcgt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTCAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
ctatcgnnnn
Secondary structure (Cloverleaf model)
>WENV180083441	Met	CAT
                   t      ACCA ctatcgnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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