The detailed information of tRNA gene sequence


Sequence ID>WENV180083451
Genome IDMPMD02062421
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 84
End posion on genome 181
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctcgcgcgc
tRNA gene sequence 
GGAGGCGCTTCCGCGGCTGGTGCCCGGCCCGGTCTTCAAAACCGGTGGGCGGCGGTAATC
CCGTCGTCGGTGGGTTCGATTCCCATGCGTCTCCGCCA
Downstream region at tRNA end position 
aaacgcctgt
Secondary structure (Cloverleaf model)
>WENV180083451	SeC	TCA
                   c      GCCA aaacgcctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C G G        T      + | | | |     G
    T       C G C C       G T G G G     C
    G         | | |                 T T
    G       C C G G
      T G C        C     TGGGCGGCGGTAATCCCGTCGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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