The detailed information of tRNA gene sequence


Sequence ID>WENV180083455
Genome IDMPMD02062561
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 15616
End posion on genome 15692
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcatcttcgc
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAAGTTCAAA
TCTTGCCCCCGCCACCA
Downstream region at tRNA end position 
agaagccgca
Secondary structure (Cloverleaf model)
>WENV180083455	fMet	CAT
                   c      ACCA agaagccgca
                     T   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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