The detailed information of tRNA gene sequence


Sequence ID>WENV180083504
Genome IDMPMD02071163
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 15200
End posion on genome 15276
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccccaaaac
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCGCAGGCTTCATAAGCCTGAAGTCACTGGTTCAAG
TCCAGTCACCGCTACCA
Downstream region at tRNA end position 
gtcaccgcag
Secondary structure (Cloverleaf model)
>WENV180083504	Met	CAT
                   c      ACCA gtcaccgcag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AAGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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