The detailed information of tRNA gene sequence


Sequence ID>WENV180083564
Genome IDMPMD02078458
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 595
End posion on genome 503
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atactgccat
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGGCAGATTGCTAATCTGCTGTAGGGTTTATAATC
TTACCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
acattataat
Secondary structure (Cloverleaf model)
>WENV180083564	Ser	GCT
                   t      GCCA acattataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTAGGGTTTATAATCTTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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