The detailed information of tRNA gene sequence


Sequence ID>WENV180083571
Genome IDMPMD02079218
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 257
End posion on genome 333
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcagattcgt
tRNA gene sequence 
AGGCCAGTAGCTCAACTTGGCAGAGCACCGGTCTCCAAAACCGGTTGTTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttcggaggcc
Secondary structure (Cloverleaf model)
>WENV180083571	Trp	CCA
                   t      GCCA ttcggaggcc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     TTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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