The detailed information of tRNA gene sequence


Sequence ID>WENV180083626
Genome IDMPMD02085633
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1117
End posion on genome 1042
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gctctatttg
tRNA gene sequence 
GGGCCCTTAGCTCAGCGGTTAGAGCAGCGGACTCATAATCCGTTGGCCCGGGGTTCGAAT
CCCTGAGGGCCCACCA
Downstream region at tRNA end position 
aatggtatca
Secondary structure (Cloverleaf model)
>WENV180083626	Ile2	CAT
                   g      ACCA aatggtatca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G T C C C     A
      C G A        A      | + | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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