The detailed information of tRNA gene sequence


Sequence ID>WENV180083627
Genome IDMPMD02086126
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 21110
End posion on genome 21186
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cgtcagtcgc
tRNA gene sequence 
TGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCAGTTCAAA
TCTGGCCCCCGCATCCA
Downstream region at tRNA end position 
tcgaaagccg
Secondary structure (Cloverleaf model)
>WENV180083627	fMet	CAT
                   c      TCCA tcgaaagccg
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G T C     A
      T G A        G      | + | | |     A
    C       C G A G       G T C A G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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