The detailed information of tRNA gene sequence


Sequence ID>WENV180083656
Genome IDMPMD02091936
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 261
End posion on genome 335
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agcagccatg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCAGTTCAAA
TCTGGCCCCCGCATCtt
Downstream region at tRNA end position 
caaaaggccg
Secondary structure (Cloverleaf model)
>WENV180083656	fMet	CAT
                   g      TCtt caaaaggccg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G T C     A
      T G A        G      | + | | |     A
    C       C G A G       G T C A G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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