The detailed information of tRNA gene sequence


Sequence ID>WENV180083709
Genome IDMPMD02099608
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 174
End posion on genome 86
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attccgaacc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGTGACAGACTCGAAATCTGTTGTACGTCATGCGTAC
CGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tacaaaattt
Secondary structure (Cloverleaf model)
>WENV180083709	Ser	CGA
                   c      GCCA tacaaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G         | |                   T T
    T       A G G T
      T T A        G     TGTACGTCATGCGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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