The detailed information of tRNA gene sequence


Sequence ID>WENV180083762
Genome IDMPMD02105185
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 267
End posion on genome 176
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacgagccgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGCCGGCTTGCTAAGCCGGTGACTGGGTTCTCCCG
GTCCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
tttacttgtc
Secondary structure (Cloverleaf model)
>WENV180083762	Ser	GCT
                   c      GCCA tttacttgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGGGTTCTCCCGGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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