The detailed information of tRNA gene sequence


Sequence ID>WENV180083801
Genome IDMPMD02110322
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1026
End posion on genome 954
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cagtcacaag
tRNA gene sequence 
TCTGCTATAGTCTAGCTGGTTAGGATACTCGGCTCTCACCCGAGCGACCCGGGTTCGAGT
CCCGGTGGCGGAAttt
Downstream region at tRNA end position 
tggcagtgtg
Secondary structure (Cloverleaf model)
>WENV180083801	Glu	CTC
                   g      Attt tggcagtgtg
                     T - A
                     C - G
                     T + G
                     G - C
                     C - G
                     T + G
                     A - T          T G
                    T     G G C C C     A
      C G A        A      | | | | |     G
    T       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     CGAC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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