The detailed information of tRNA gene sequence


Sequence ID>WENV180083827
Genome IDMPMD02114687
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 164
End posion on genome 252
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttctgacaga
tRNA gene sequence 
TCTGCTGTAGTATAGTGGTGAGTATTTCCGCCTGTCACGCGGAAGAGGCGGGTTCAATTT
CCGCCCGGGTTCAATTCCCGGCAGCGGAGttt
Downstream region at tRNA end position 
tggcaccttc
Secondary structure (Cloverleaf model)
>WENV180083827	Asp	GTC
                   a      Gttt tggcaccttc
                     T - A
                     C - G
                     T + G
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C C G G G     C
    G       + | | +                 T T
    T       G T A T
      G A          T     AGAGGCGGGTTCAATTTCCGC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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