The detailed information of tRNA gene sequence


Sequence ID>WENV180083870
Genome IDMPMD02118228
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 160
End posion on genome 88
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttatttataa
tRNA gene sequence 
TTCCTCATGGTGTAGTTGGTAACATTTCCGCCTGTCACGCGGACGCCCGGGGTTCAATTC
CCCGTGGGGAAGCtt
Downstream region at tRNA end position 
tttgagcacc
Secondary structure (Cloverleaf model)
>WENV180083870	Asp	GTC
                   a      GCtt tttgagcacc
                     T - A
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      T G A        G      | | | | |     A
    T       T G T G       C G G G G     C
    G       | | | +                 T T
    G       A C A T
      T A          T     CGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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