The detailed information of tRNA gene sequence


Sequence ID>WENV180083911
Genome IDMPMD02123236
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 63831
End posion on genome 63921
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaataaaacc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCATGATTGGAATTCATGTATACGGTAACCCCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atttctacaa
Secondary structure (Cloverleaf model)
>WENV180083911	Ser	GGA
                   c      GCCA atttctacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGTAACCCCGTATC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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