The detailed information of tRNA gene sequence


Sequence ID>WENV180083922
Genome IDMPMD02124040
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 338
End posion on genome 414
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aagtctctat
tRNA gene sequence 
TGCGGGATGGAGCAGTCTGGTAGCTCGTTAGGCTCATAACCTAAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCATCCA
Downstream region at tRNA end position 
atcttatgct
Secondary structure (Cloverleaf model)
>WENV180083922	fMet	CAT
                   t      TCCA atcttatgct
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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