The detailed information of tRNA gene sequence


Sequence ID>WENV180083928
Genome IDMPMD02125044
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 345
End posion on genome 420
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgcaagaagt
tRNA gene sequence 
AGGTGTGTAGCTCAATGGCTAGAGCACTGGATTCCAAATCCAGCGGTTGGGGGTTCGAGT
CCCTCCACACCTGCCA
Downstream region at tRNA end position 
ctgagaacgg
Secondary structure (Cloverleaf model)
>WENV180083928	Trp	CCA
                   t      GCCA ctgagaacgg
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    C       G A G C
      T A          A     CGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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