The detailed information of tRNA gene sequence


Sequence ID>WENV180083952
Genome IDMPMD02127369
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 102
End posion on genome 6
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ataactatgc
tRNA gene sequence 
GGAAGTGGTCAGGTTCTGGTGAGCCTCCTGGACTTCAAATCCAGTGTGGGGCGTGAGCAG
CGTCCTAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tttttnnnnn
Secondary structure (Cloverleaf model)
>WENV180083952	SeC	TCA
                   c      GCCA tttttnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    T     T A C C C     A
      T C T        C      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G A          C     TGTGGGGCGTGAGCAGCGTCCTAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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