The detailed information of tRNA gene sequence


Sequence ID>WENV180083966
Genome IDMPMD02128865
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 466
End posion on genome 552
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctgcctgcg
tRNA gene sequence 
GGAGGCGTGGCCGAGTGGTCGAAGGCGGCGGTTTTGAAAACCGCAGTCCTGCAAGGGACC
GGGGGTTCGAATCCCTCCGCCTCCGCCc
Downstream region at tRNA end position 
aaatattcac
Secondary structure (Cloverleaf model)
>WENV180083966	Ser	TGA
                   g      GCCc aaatattcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     AGTCCTGCAAGGGACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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