The detailed information of tRNA gene sequence


Sequence ID>WENV180083973
Genome IDMPMD02130434
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 242
End posion on genome 166
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
acctaaggat
tRNA gene sequence 
GGGCCGATAGCTCAATTGGTTAGAGCTGCGAACTCATAATTCGTAGGTTCCAGGTTCAAG
TCCTGGTCGGCCCACCA
Downstream region at tRNA end position 
tgtttgattt
Secondary structure (Cloverleaf model)
>WENV180083973	Ile2	CAT
                   t      ACCA tgtttgattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     G G T C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    G + T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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