The detailed information of tRNA gene sequence


Sequence ID>WENV180084048
Genome IDMPMD02140986
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 254
End posion on genome 164
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagttgcgt
tRNA gene sequence 
GGAGAGTTCGCATAGAGGCCTAGTGCGTCGGTTTGCTAAACCGATGTCGGATTATTTCCG
ACCATGGGTTCGAATCCCATACTCTCCGCCA
Downstream region at tRNA end position 
taatgttgaa
Secondary structure (Cloverleaf model)
>WENV180084048	Ser	GCT
                   t      GCCA taatgttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T A C C C     A
      A G A        C      | | | | |     G
    G       T A C G       A T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TGTCGGATTATTTCCGACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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