The detailed information of tRNA gene sequence


Sequence ID>WENV180084079
Genome IDMPMD02145355
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 2464
End posion on genome 2388
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaaccggtc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCGCCCCTGATAAGGGCGAGGTCACTGGTTCAAA
TCCAGTTAGGCCCACCA
Downstream region at tRNA end position 
tcccggattt
Secondary structure (Cloverleaf model)
>WENV180084079	Ile	GAT
                   c      ACCA tcccggattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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