The detailed information of tRNA gene sequence


Sequence ID>WENV180084091
Genome IDMPMD02146704
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 265
End posion on genome 348
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccatcacaT
tRNA gene sequence 
GACACTGTGTCCGAGCGGCTAAGGAGATGGACTCGAAATCCACCGGGCTCTGCCCGCAGG
GGTTCGAATCCCCTCGGTGTCGTtt
Downstream region at tRNA end position 
tgctatcgct
Secondary structure (Cloverleaf model)
>WENV180084091	Ser	CGA
                   T      GTtt tgctatcgct
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       A G G G G     C
    G         | | |                 T T
    C       A G G A
      T A          G     CGGGCTCTGCCCGC
                    A   C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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