The detailed information of tRNA gene sequence


Sequence ID>WENV180084114
Genome IDMPMD02149140
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1165
End posion on genome 1083
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
aaacagcctc
tRNA gene sequence 
GACACCGTGGCCGAGTGGTTAAGGCGCTAGATTAGAAATCTAGTGGGCTTTGCCCGCGTG
AGTTCGAACCTCACCGGTGTCGCtc
Downstream region at tRNA end position 
ttttttgttt
Secondary structure (Cloverleaf model)
>WENV180084114	Ser	AGA
                   c      GCtc ttttttgttt
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          C A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTTTGCCCGC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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