The detailed information of tRNA gene sequence


Sequence ID>WENV180084115
Genome IDMPMD02149140
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1016
End posion on genome 944
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aacaagtatt
tRNA gene sequence 
TCCTGGTTGGTGTAGTTGGTAACATTTCCGCCTGTCACGCGGACGCCCGGGGTTCGATTC
CCCGACTAGGAGCat
Downstream region at tRNA end position 
tacctttttt
Secondary structure (Cloverleaf model)
>WENV180084115	Asp	GTC
                   t      GCat tacctttttt
                     T - A
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     T - A          T T
                    T     G C C C C     A
      T G A        G      | | | | |     G
    T       T G T G       C G G G G     C
    G       | | | +                 T T
    G       A C A T
      T A          T     CGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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