The detailed information of tRNA gene sequence


Sequence ID>WENV180084126
Genome IDMPMD02149806
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 8557
End posion on genome 8481
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaatttcggt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCCGGCCGCTCATAACGGTCTGGTCGCAGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
aattttttcc
Secondary structure (Cloverleaf model)
>WENV180084126	Ile2	CAT
                   t      ACCA aattttttcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTC
                    G - C
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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