The detailed information of tRNA gene sequence


Sequence ID>WENV180084138
Genome IDMPMD02150940
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 2022
End posion on genome 1935
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtccgtagt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTTGACTCGAAATCAAGTGTGGGGCAACTCACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttcgagtg
Secondary structure (Cloverleaf model)
>WENV180084138	Ser	CGA
                   t      GCCA ttttcgagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTGGGGCAACTCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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