The detailed information of tRNA gene sequence


Sequence ID>WENV180084139
Genome IDMPMD02150940
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1910
End posion on genome 1819
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagagcgtgt
tRNA gene sequence 
GGAGGGGTGACCGAGTTGGCCGAAGGTGCACGATTGGAAATCGTGTGTGCTCCAAAAGGG
TACCGAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
gcggaagatt
Secondary structure (Cloverleaf model)
>WENV180084139	Ser	GGA
                   t      GCCA gcggaagatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  C         A G G T
    C G A          G     TGTGCTCCAAAAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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