The detailed information of tRNA gene sequence


Sequence ID>WENV180084153
Genome IDMPMD02152565
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1271
End posion on genome 1360
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgccccact
tRNA gene sequence 
GGAAGGGTGCCGGAGTGGTCGAACGGGGCGCTCTCGAAAAGCGTTGTGCGAGCAATCGCA
CCGGGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
tccttcatca
Secondary structure (Cloverleaf model)
>WENV180084153	Ser	CGA
                   t      GCCA tccttcatca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGCGAGCAATCGCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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