The detailed information of tRNA gene sequence


Sequence ID>WENV180084162
Genome IDMPMD02153342
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1839
End posion on genome 1768
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
TTCCTCATGGTGTAGTTGGTAACATTTCCGCCTGTCACGCGGACGCCCGGGGTTCAATTC
CCCGTGGGGAAGtat
Downstream region at tRNA end position 
tttagtccag
Secondary structure (Cloverleaf model)
>WENV180084162	Asp	GTC
                   n      Gtat tttagtccag
                     T - A
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      T G A        G      | | | | |     A
    T       T G T G       C G G G G     C
    G       | | | +                 T T
    G       A C A T
      T A          T     CGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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