The detailed information of tRNA gene sequence


Sequence ID>WENV180084209
Genome IDMPMD02156699
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1279
End posion on genome 1208
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcagagggc
tRNA gene sequence 
AGCGAAGTGGCGCAGCGGTAGCGCGTTGGGCTCATAACCCAAAGGTCGGAGGATCGAAAC
CTCCCTTCGCTAtat
Downstream region at tRNA end position 
ttttgtattt
Secondary structure (Cloverleaf model)
>WENV180084209	Met	CAT
                   c      Atat ttttgtattt
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          A A
                    T     C C T C C     A
        G A        G      | | | | |     G
      C     C G C G       G G A G G     C
      G     | | | |                 A T
      G     G C G C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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