The detailed information of tRNA gene sequence


Sequence ID>WENV180084213
Genome IDMPMD02157073
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 262
End posion on genome 174
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatgaatatt
tRNA gene sequence 
GGAGAGGTGGCTCGAGTGGTTGAAGGCGGCTGTCTTGAAAACAGCTAAGGGGGAAACTCC
TTCGAGGGTTCGAATCCCTCCCTCTCCGCaa
Downstream region at tRNA end position 
cttgacattt
Secondary structure (Cloverleaf model)
>WENV180084213	Ser	TGA
                   t      GCaa cttgacattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T G A G        G      | | | | |     G
  G         C T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TAAGGGGGAAACTCCTTC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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