The detailed information of tRNA gene sequence


Sequence ID>WENV180084252
Genome IDMPMD02162446
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 505
End posion on genome 588
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcaacgcaaC
tRNA gene sequence 
GACACTGTGCCCGAGCGGTTCAGGAGATGGACTCGAAATCCATTGGGCTCTGCCCGCAGG
GGTTCGAATCCCCTCGGTGTCGTtt
Downstream region at tRNA end position 
tgcggtttga
Secondary structure (Cloverleaf model)
>WENV180084252	Ser	CGA
                   C      GTtt tgcggtttga
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       G C C C       A G G G G     C
    G         | |                   T T
    T       A G G A
      T C          G     TGGGCTCTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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