The detailed information of tRNA gene sequence


Sequence ID>WENV180084253
Genome IDMPMD02162446
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 349
End posion on genome 268
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcagggacag
tRNA gene sequence 
GACACTTTGCCTGAGTGGTCTAAGGGGGCGGACTCAAGTTCCACTAGCGCGAGCTGCGTG
GGTTCAAATCCCGCAGGTGTCAtgt
Downstream region at tRNA end position 
gtgcgaaagc
Secondary structure (Cloverleaf model)
>WENV180084253	Leu	CAA
                   g      Atgt gtgcgaaagc
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C G C C C     A
      T G A        G      | + | | |     A
    G       G T C C       G T G G G     C
    G         + | |                 T T
    T       A G G G
      C T A        G     TAGCGCGAGCTGC
                    G - C
                    C   A
                    G - C
                    G - C
                    A - T
                  C       T
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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