The detailed information of tRNA gene sequence


Sequence ID>WENV180084265
Genome IDMPMD02164462
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 787
End posion on genome 886
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atcggctctt
tRNA gene sequence 
GGAAGTGCTTGTCGTACTGGTGACGGCCCTGGGCTTCAAACCCAGTGAGGCATGCTGAGA
GGCACTGCTTGGCGGGTTCGATTCCCGTGCATTTCCGCCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180084265	SeC	TCA
                   t      GCCA annnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     T - A
                     G - C
                     C - G          T T
                    T     T G C C C     A
      C A T        T      + | | | |     G
    T       G C T G       G C G G G     C
    G       | | + |                 T T
    G       C G G C
      T G A        C     TGAGGCATGCTGAGAGGCACTGCTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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