The detailed information of tRNA gene sequence


Sequence ID>WENV180084281
Genome IDMPMD02167534
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 55053
End posion on genome 55140
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagagatttc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGACGAAGGCGGTAGACTCGAAATCTATTGTAGGGACCTCCCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
tcattccaca
Secondary structure (Cloverleaf model)
>WENV180084281	Ser	CGA
                   c      GCtc tcattccaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGTAGGGACCTCCCTACC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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