The detailed information of tRNA gene sequence


Sequence ID>WENV180084294
Genome IDMPMD02171132
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 399
End posion on genome 488
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taaatgatat
tRNA gene sequence 
GCAGGTGTCCCATAGTTCGGCCGATTGGAACGGCTTCGTAAGCCGTCAGAATGTAAATTC
TCGCGTCAGTTCAAATCTGACCACCTGCTCta
Downstream region at tRNA end position 
cacaagttag
Secondary structure (Cloverleaf model)
>WENV180084294	Thr	CGT
                   t      TCta cacaagttag
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A G T C     A
    T T G A        C      | | | | |     A
  C         T A C C       G T C A G     C
  G           | | |                 T T
  G         T T G G
    C C G A        A     CAGAATGTAAATTCTCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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