The detailed information of tRNA gene sequence


Sequence ID>WENV180084321
Genome IDMPMD02174405
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 547
End posion on genome 472
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgcctcaaat
tRNA gene sequence 
GGCCCGTTCGTCTAGAGGCCTAGGATACATGGTTCTCATCCATGCGACACGGGTTCAAAT
CCCGTACGGGCTACCA
Downstream region at tRNA end position 
gatagggcac
Secondary structure (Cloverleaf model)
>WENV180084321	Glu	CTC
                   t      ACCA gatagggcac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | +                 T T
    C       G G A T
      C T A        A     CGAC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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