The detailed information of tRNA gene sequence


Sequence ID>WENV180084339
Genome IDMPMD02175466
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 11604
End posion on genome 11680
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttctacggtt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
cttccaagag
Secondary structure (Cloverleaf model)
>WENV180084339	fMet	CAT
                   t      ACCA cttccaagag
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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