The detailed information of tRNA gene sequence


Sequence ID>WENV180084365
Genome IDMPMD02179643
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 38255
End posion on genome 38179
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcacaagtgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
tctaacacca
Secondary structure (Cloverleaf model)
>WENV180084365	fMet	CAT
                   t      ACCA tctaacacca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C A G G     C
    A       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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