The detailed information of tRNA gene sequence


Sequence ID>WENV180084367
Genome IDMPMD02179659
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 163
End posion on genome 72
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgagatcgat
tRNA gene sequence 
GGAGAGATGTCCGAGTTGGCTTAAGGTACTCGCCTGGAAAGCGGGTGTGCCCCAAAAGGG
TACCCGGGGTTCGAATCCCCGTCTCTCCGCCA
Downstream region at tRNA end position 
cgcggctcac
Secondary structure (Cloverleaf model)
>WENV180084367	Ser	GGA
                   t      GCCA cgcggctcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       C G G G G     C
  G           | |                   T T
  C         A G G T
    T T A          A     TGTGCCCCAAAAGGGTACC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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