The detailed information of tRNA gene sequence


Sequence ID>WENV180084368
Genome IDMPMD02179736
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 780
End posion on genome 690
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcccagcgaa
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aacctaacgg
Secondary structure (Cloverleaf model)
>WENV180084368	Ser	GGA
                   a      GCCA aacctaacgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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