The detailed information of tRNA gene sequence


Sequence ID>WENV180084380
Genome IDMPMD02182758
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 7799
End posion on genome 7724
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaccctgagt
tRNA gene sequence 
AGGGCGGTAGTTCAATTGGTAGAGCAACGGTCTCCAAAACCGTCTGTTGGGGGTTCGAAT
CCCTCCCGCCCTGCCA
Downstream region at tRNA end position 
atcaagttta
Secondary structure (Cloverleaf model)
>WENV180084380	Trp	CCA
                   t      GCCA atcaagttta
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     CTGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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