The detailed information of tRNA gene sequence


Sequence ID>WENV180084387
Genome IDMPMD02183821
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 560
End posion on genome 490
Amino Acid Sup
Anticodon TCA
Upstream region at tRNA start position 
attttcttaa
tRNA gene sequence 
GGGAGTTTAATTTAATGGTAAAATAATAGTCTTCAAAATTATCTATATGGGTTCAAATCC
TATAACTCTCGtac
Downstream region at tRNA end position 
atatatatat
Secondary structure (Cloverleaf model)
>WENV180084387	Sup	TCA
                   a      Gtac atatatatat
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A          T A
                    T     T A T C C     A
        A A        A      | | + | |     A
      T     T T T A       A T G G G     C
      G     | | | |                 T T
      G     A A A T
        T A        A     CTAT
                    A - T
                    T - A
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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