The detailed information of tRNA gene sequence


Sequence ID>WENV180084406
Genome IDMPMD02186154
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 44
End posion on genome 117
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caactccaat
tRNA gene sequence 
AGAGGTGAAGTGTTACGGTAGCACGATGGTCTCCAAAACCATAAGCCGGGGTTCGACTCC
CTGCACCTCTGCCA
Downstream region at tRNA end position 
cttgacttta
Secondary structure (Cloverleaf model)
>WENV180084406	Trp	CCA
                   t      GCCA cttgacttta
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    A     G T C C C     A
        A T        A      | + | | |     G
      C     T G T G       C G G G G     C
      G     + | | |                 T T
      G     G C A C
        T A        G     AAGC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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