The detailed information of tRNA gene sequence


Sequence ID>WENV180084420
Genome IDMPMD02187543
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 237
End posion on genome 162
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttaaaatagt
tRNA gene sequence 
GCTCTTGTAGTGTAGTGGACCAGCATCGTAGGCTTTCGACCTATGGACACGGGTTCGAAT
CCCGTCGAGAGTGCCA
Downstream region at tRNA end position 
tttttcaggg
Secondary structure (Cloverleaf model)
>WENV180084420	Glu	TTC
                   t      GCCA tttttcaggg
                     G + T
                     C - G
                     T - A
                     C - G
                     T - A
                     T + G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      | | | | |     G
    G       T G T G       A C G G G     C
    G       + | | +                 T T
    A       G C A T
      C C A        C     GGAC
                    G + T
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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