The detailed information of tRNA gene sequence


Sequence ID>WENV180084435
Genome IDMPMD02190918
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 356
End posion on genome 275
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtaggctcaa
tRNA gene sequence 
GGCACCTTGGCCGAGAGGTTAAGGCGGCAGATTCGAAATCTGCTGGGCTTTGCCCGCGCA
GGTTCGAATCCTGCAGGTGTCGtgt
Downstream region at tRNA end position 
attgttagct
Secondary structure (Cloverleaf model)
>WENV180084435	Ser	CGA
                   a      Gtgt attgttagct
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T A
                    T     C G T C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTTTGCCCGC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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