The detailed information of tRNA gene sequence


Sequence ID>WENV180084487
Genome IDMPMD02200172
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 10821
End posion on genome 10732
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgaacaagtc
tRNA gene sequence 
GGAGAGGTGTCAGAGCGGCTGAATGAGCACGCTTGGAAAGCGTGTGTGTCGGCAACGGCA
CCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
ttctcacggc
Secondary structure (Cloverleaf model)
>WENV180084487	Ser	GGA
                   c      GCCA ttctcacggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C T       G G G G G     C
    G         | | |                 T T
    C       A T G A
      T G A        G     TGTGTCGGCAACGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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