The detailed information of tRNA gene sequence


Sequence ID>WENV180084494
Genome IDMPMD02201516
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 147
End posion on genome 234
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttacttaatt
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGCTGAATGCACCGGTCTTGAAAACCGGCAAGGGTTTATGCCCT
TCGGGGGTTCAAATCCCTCCCCCTCCGCtt
Downstream region at tRNA end position 
gctaaggagt
Secondary structure (Cloverleaf model)
>WENV180084494	Ser	TGA
                   t      GCtt gctaaggagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CAAGGGTTTATGCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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